Here is a sample session with stssearch % stssearch Search a DNA database for matches with a set of STS primers Input nucleo
http://www.codebf.com/read/417857/2097853
Here is a sample session with patmatmotifs % patmatmotifs -full Search a PROSITE motif database with a protein sequence Inpu
http://www.codebf.com/read/417857/2097856
Here is a sample session with cai % cai TEMBL:AB009602 CAI codon adaptation index Codon usage file [Eyeast_cai.cut]:
http://www.codebf.com/read/417857/2097860
Here is a sample session with chips % chips -sbeg 135 -send 1292 Codon usage statistics Input nucleotide sequence(s): tem
http://www.codebf.com/read/417857/2097863
Here is a sample session with dbigcg % dbigcg Index a GCG formatted database Database name: EMBL EMBL : EMBL
http://www.codebf.com/read/417857/2097884
Here is a sample session with dotmatcher % dotmatcher tsw:hba_human tsw:hbb_human -graph cps Displays a thresholded dotplot
http://www.codebf.com/read/417857/2097890
Here is a sample session with diffseq % diffseq tembl:ap000504 tembl:af129756 Find differences between nearly identical sequ
http://www.codebf.com/read/417857/2097891
Here is a sample session with showseq % showseq tembl:paamir -sbeg 1 -send 100 Display a sequence with features, translation
http://www.codebf.com/read/417857/2097902
Here is a sample session with dbxfasta % dbxfasta Database b+tree indexing for fasta file databases Basename for index files
http://www.codebf.com/read/417857/2097915
Here is a sample session with polydot % polydot globins.fasta -gtitle="Polydot of globins.fasta" -graph cps Displays all-aga
http://www.codebf.com/read/417857/2097936
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