Here is a sample session with trimseq % trimseq untrimmed.seq trim1.seq -window 1 -percent 100 Trim ambiguous bits off the ends of sequences Go to the input files for this exampleGo to the output files for this example Example 2 % trimseq untrimmed.seq trim2.seq -window 5 -percent 40 Trim ambiguous bits off the ends of sequences Go to the output files for this example Example 3 % trimseq untrimmed.seq trim3.seq -window 5 -percent 50 Trim ambiguous bits off the ends of sequences Go to the output files for this example Example 4 % trimseq untrimmed.seq trim4.seq -window 5 -percent 50 -strict Trim ambiguous bits off the ends of sequences Go to the output files for this example Example 5 % trimseq untrimmed.seq trim5.seq -window 5 -percent 50 -strict -noright Trim ambiguous bits off the ends of sequences Go to the output files for this example
